Index _ | A | B | C | D | E | F | G | M | O | S | T | W _ __annotations__ (genomicarrays.build_options.FeatureAnnotationOptions attribute) (genomicarrays.build_options.MatrixOptions attribute) (genomicarrays.build_options.SampleMetadataOptions attribute) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) __dataclass_fields__ (genomicarrays.build_options.FeatureAnnotationOptions attribute) (genomicarrays.build_options.MatrixOptions attribute) (genomicarrays.build_options.SampleMetadataOptions attribute) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) __dataclass_params__ (genomicarrays.build_options.FeatureAnnotationOptions attribute) (genomicarrays.build_options.MatrixOptions attribute) (genomicarrays.build_options.SampleMetadataOptions attribute) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) __del__() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) __eq__() (genomicarrays.build_options.FeatureAnnotationOptions method) (genomicarrays.build_options.MatrixOptions method) (genomicarrays.build_options.SampleMetadataOptions method) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice method) __getitem__() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) __hash__ (genomicarrays.build_options.FeatureAnnotationOptions attribute) (genomicarrays.build_options.MatrixOptions attribute) (genomicarrays.build_options.SampleMetadataOptions attribute) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) __init__() (genomicarrays.build_options.FeatureAnnotationOptions method) (genomicarrays.build_options.MatrixOptions method) (genomicarrays.build_options.SampleMetadataOptions method) (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice method) __len__() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice method) __match_args__ (genomicarrays.build_options.FeatureAnnotationOptions attribute) (genomicarrays.build_options.MatrixOptions attribute) (genomicarrays.build_options.SampleMetadataOptions attribute) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) __post_init__() (genomicarrays.build_options.FeatureAnnotationOptions method) (genomicarrays.build_options.MatrixOptions method) __repr__() (genomicarrays.build_options.FeatureAnnotationOptions method) (genomicarrays.build_options.MatrixOptions method) (genomicarrays.build_options.SampleMetadataOptions method) (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice method) A aggregate_function (genomicarrays.build_options.FeatureAnnotationOptions attribute), [1] B build_genomicarray() (in module genomicarrays.build_genomicarray) C chunk_size (genomicarrays.build_options.MatrixOptions attribute), [1] column_types (genomicarrays.build_options.FeatureAnnotationOptions attribute), [1] (genomicarrays.build_options.SampleMetadataOptions attribute), [1] compression (genomicarrays.build_options.MatrixOptions attribute), [1] compression_level (genomicarrays.build_options.MatrixOptions attribute), [1] create_tiledb_array() (in module genomicarrays.buildutils_tiledb_array) D dtype (genomicarrays.build_options.FeatureAnnotationOptions attribute), [1] (genomicarrays.build_options.MatrixOptions attribute), [1] (genomicarrays.build_options.SampleMetadataOptions attribute), [1] E expected_agg_function_length (genomicarrays.build_options.FeatureAnnotationOptions attribute), [1] extract_bw_intervals_as_vec() (in module genomicarrays.utils_bw) extract_bw_values() (in module genomicarrays.utils_bw) extract_bw_values_as_vec() (in module genomicarrays.utils_bw) F feature_annotation (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) FeatureAnnotationOptions (class in genomicarrays.build_options) G GenomicArrayDataset (class in genomicarrays.GenomicArrayDataset) GenomicArrayDatasetSlice (class in genomicarrays.GenomicArrayDatasetSlice) genomicarrays module genomicarrays.build_genomicarray module genomicarrays.build_options module genomicarrays.buildutils_tiledb_array module genomicarrays.GenomicArrayDataset module genomicarrays.GenomicArrayDatasetSlice module genomicarrays.queryutils_tiledb_frame module genomicarrays.utils_bw module get_a_column() (in module genomicarrays.queryutils_tiledb_frame) get_feature_annotation_column() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_feature_annotation_columns() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_feature_annotation_index() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_feature_subset() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_index() (in module genomicarrays.queryutils_tiledb_frame) get_matrix_subset() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_sample_metadata_column() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_sample_metadata_columns() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_sample_subset() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) get_schema_names_frame() (in module genomicarrays.queryutils_tiledb_frame) get_slice() (genomicarrays.GenomicArrayDataset.GenomicArrayDataset method) M matrix (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) matrix_attr_name (genomicarrays.build_options.MatrixOptions attribute), [1] MatrixOptions (class in genomicarrays.build_options) module genomicarrays genomicarrays.build_genomicarray genomicarrays.build_options genomicarrays.buildutils_tiledb_array genomicarrays.GenomicArrayDataset genomicarrays.GenomicArrayDatasetSlice genomicarrays.queryutils_tiledb_frame genomicarrays.utils_bw O optimize_tiledb_array() (in module genomicarrays.buildutils_tiledb_array) S sample_metadata (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice attribute) SampleMetadataOptions (class in genomicarrays.build_options) shape (genomicarrays.GenomicArrayDataset.GenomicArrayDataset property) (genomicarrays.GenomicArrayDatasetSlice.GenomicArrayDatasetSlice property) skip (genomicarrays.build_options.FeatureAnnotationOptions attribute), [1] (genomicarrays.build_options.MatrixOptions attribute), [1] (genomicarrays.build_options.SampleMetadataOptions attribute), [1] subset_array() (in module genomicarrays.queryutils_tiledb_frame) subset_frame() (in module genomicarrays.queryutils_tiledb_frame) T tiledb_store_name (genomicarrays.build_options.FeatureAnnotationOptions attribute), [1] (genomicarrays.build_options.MatrixOptions attribute), [1] (genomicarrays.build_options.SampleMetadataOptions attribute), [1] W wrapper_extract_bw_values() (in module genomicarrays.utils_bw) write_array_chunks_to_tiledb() (in module genomicarrays.buildutils_tiledb_array) write_frame_intervals_to_tiledb() (in module genomicarrays.buildutils_tiledb_array)